Phylogenetic analysis of tribe Neptini Newman, 1870 based on COI gene (Lepidoptera: Nymphalidae, Limenitidinae)

Authors

DOI:

https://doi.org/10.57065/shilap.1164

Keywords:

Lepidoptera, Nymphalidae, Limenitidinae, Neptini, Phylogeny, COI gene, DNA Barcoding, India

Abstract

Papilionoidea Latreille, 1802 are widely recognized for their ecological significance, diverse morphology, and role as bioindicators of environmental health. Among the numerous tribes within the subfamily Limenitidinae Behr, 1864, the tribe Neptini Newman, 1870 comprises a distinct group of brushfooted species predominantly distributed across the Oriental and Palearctic regions. The tribe includes several genera, with Neptis Fabricius, 1807 being the most speciose and widespread. The current research aims to reconstruct the phylogenetic trees by amplifying the partial sequences of the mitochondrial gene COI to produce a DNA reference library and determine the evolutionary relationships among the species of tribe Neptini. Sequences of COI gene of eight species have been submitted to NCBI. The examination of nucleotide composition at the first, second, and third codon locations revealed a considerable A + T bias, particularly at the third codon position. Genetic divergence based on COI ranges from 5.0% to 11.4% of presently studies species. 1000 bootstrapped Neighbor-joining with Kimura-2 parameter and Maximum likelihood phylogenetic tree constructed based on COI gene sequences.

Downloads

Download data is not yet available.

Global Statistics ℹ️

Cumulative totals since publication
3
Views
0
Downloads
3
Total

References

Chazot, N., Wahlberg, N., Freitas, A. V. L., Mitter, C., Labandeira, C., Sohn, J. C., Sahoo, R. K., Seraphim, N., De Jong, R., & Heikkilä, M. (2019). Priors and posteriors in Bayesian timing of divergence analyses: the age of butterflies revisited. Systematic biology, 68(5), 797-813. https://doi.org/10.1093/sysbio/syz002 PMid:30690622 PMCid:PMC6893297

Dhungel, B., & Wahlberg, N. (2018). Molecular systematics of the subfamily Limenitidinae (Lepidoptera: Nymphalidae). PeerJ, 6, e4311. https://doi.org/10.7717/peerj.4311 PMid:29416955 PMCid:PMC5798401

Folmer, O., Black, M., Hoeh, W., Lutz, R., & Vrijenhoek, R., (1994). DNA primers for amplification of mitochondrial cytochrome oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology, 3, 294-299. https://doi.org/10.1371/journal.pone.0013102 PMid:20957043 PMCid:PMC2948509

Hajibabaei, M., Janzen, D. H., Burns, J. M., Hallwachs, W., & Hebert, P. D. (2006). DNA barcodes distinguish species of tropical Lepidoptera. Proceedings of the National Academy of Sciences, 103(4), 968-971. https://doi.org/10.1073/pnas.0510466103 PMid:16418261 PMCid:PMC1327734

Hebert, P. D. N., Cywinska, A., Ball, S. L., & deWaard, J. R. (2003). Biological identifications through DNA barcodes. Proceedings of the Royal Society B: Biological Sciences, 270(1512), 313-321. https://doi.org/10.1098/rspb.2002.2218 PMid:12614582 PMCid:PMC1691236

Hebert, P. D. N., Stoeckle, M. Y., Zemlak, T. S., & Francis, C. M. (2004). Identification of Birds through DNA Barcodes. PLOS Biology, 2(10), 312. https://doi.org/10.1371/journal.pbio.0020312 PMid:15455034 PMCid:PMC518999

Janzen, D. H., Hajibabaei, M., Burns, J. M., Hallwachs, W., Remigio, E., & Hebert, P. D. (2005). Wedding biodiversity inventory of a large and complex Lepidoptera fauna with DNA barcoding. Philosophical Transactions of the Royal Society B: Biological Sciences, 360(1462), 1835-1845. https://doi.org/10.1098/rstb.2005.1715 PMid:16214742 PMCid:PMC1609230

Kokate, P. P., Techtmann, S. M., & Werner, T. (2021). Codon usage bias and dinucleotide preference in 29 Drosophila species. G3, 11(8), 191. https://doi.org/10.1093/g3journal/jkab191 PMid:34849812 PMCid:PMC8496323

Kumar, V., Kundu, S., Chakraborty, R., Sanyal, A., Raha, A., Sanyal, O., Ranjan, R., Pakrashi, A., Tyagi, K., & Chandra, K. (2019). DNA barcoding of Geometridae moths (Insecta: Lepidoptera): a preliminary effort from Namdapha National Park, Eastern Himalaya. Mitochondrial DNA Part B, 4(1), 309-315. https://doi.org/10.1080/23802359.2018.1544037

Lunt, D. H., & Hyman, B. C. (1977). Animal mitochondrial DNA recombination. Nature, 1997(387), 247. https://doi.org/10.1038/387247a0 PMid:9153388

Meyer, C. P., & Paulay, G. (2005). DNA Barcoding: Error Rates Based on Comprehensive Sampling. PLoS Biology, 3(12): e422. https://doi.org/10.1371/journal.pbio.0030422 PMid:16336051 PMCid:PMC1287506

Mullen, S. P., Savage, W. K., Wahlberg, N., & Willmott, K. R. (2011). Rapid diversification and not clade age explains high diversity in neotropical Adelpha butterflies. Proceedings of the Royal Society of London Biological Sciences, 278, 1777-1785. https://doi.org/10.1098/rspb.2010.2140 PMid:21106589 PMCid:PMC3097834

Näsvall, K., Boman, J., Talla, V., & Backström, N. (2023). Base composition, codon usage, and patterns of gene sequence evolution in butterflies. Genome Biology and Evolution, 15(8), 150. https://doi.org/10.1093/gbe/evad150 PMid:37565492 PMCid:PMC10462419

Powell, J. A. (2009). Lepidoptera. In V. H. Resh & T. R. Carde (eds.). Encylopedia of Insects. Academic Press. https://doi.org/10.1016/B978-0-12-374144-8.00160-0

Yang, F., Ding, F., Chen, H., He, M., Zhu, S., Ma, X., Jiang, L., & Li, H. (2018). DNA barcoding for the identification and authentication of animal species in traditional medicine. Evidence Based Complementary and Alternative Medicine, 2018(1), 5160254. https://doi.org/10.1155/2018/5160254 PMid:29849709 PMCid:PMC5937547

Wells, J. D., & Sperling, F. A. (2001). DNA-based identification of forensically important Chrysomyinae (Diptera: Calliphoridae). Forensic Science International, 120, 110-115. https://doi.org/10.1016/s0379-0738(01)00414-5 PMid:11457617

Wahlberg, N. (2007). The subfamily Limenitidinae. http://www.nymphalidae.net/Nymphalidae/Limenitidinae/Limenitidinae.htm.

Wahlberg, N., Leneveu, J., Kodandaramaiah, U., Peña, C., Nylin, S., Freitas, A. V. L., & Brower, A. V. Z. (2009). Nymphalid butterflies diversify following near demise at the Cretaceous/Tertiary boundary. Proceedings of the Royal Society of London B Biological Sciences, 276, 4295-4302. https://doi.org/10.1098/rspb.2009.1303 PMid:19793750 PMCid:PMC2817107

Yang, M., Li, J., Su, S., Zhang, H., Wang, Z., Ding, W., & Li, L. (2021). The mitochondrial genomes of Tortricidae: nucleotide composition, gene variation and phylogenetic performance. BMC genomics, 22, 1-12. https://doi.org/10.1186/s12864-021-08041-y PMid:34674653 PMCid:PMC8532297

Zhang, M., Cao, T. W., Zhong, Y., & Guo, Y. P. (2011). Phylogeny of Limenitidinae butterflies (Lepidoptera: Nymphalidae) inferred from mitochondrial Cytochrome Oxidase I gene sequences. Agricultural Sciences in China, 10(4), 566-575. https://doi.org/10.1016/S1671-2927(11)60038-2

Downloads

Published

2026-09-30

How to Cite

Neeraj, N., Walia, G. K., & Sidhu, A. K. (2026). Phylogenetic analysis of tribe Neptini Newman, 1870 based on COI gene (Lepidoptera: Nymphalidae, Limenitidinae). SHILAP Revista De lepidopterología, 54(215), 623–636. https://doi.org/10.57065/shilap.1164

Issue

Section

ISSUE